mpirun --mca io romio314 -np 4 ./build/mpitest && h5dump -p example.h5 -------------------------------------------------------------------------- A requested component was not found, or was unable to be opened. This means that this component is either not installed or is unable to be used on your system (e.g., sometimes this means that shared libraries that the component requires are unable to be found/loaded). Note that Open MPI stopped checking at the first component that it did not find. Host: archlinux Framework: io Component: romio314 -------------------------------------------------------------------------- HDF5-DIAG: Error detected in HDF5 (1.12.0) MHDF5-DIAG: Error detected in HDF5 (1.12.0) MPI-process 2:HDF5-DIAG: Error detected in HDF5 (1.12.0) MPI-process 3: #000:HDF5-DIAG: Error detected in HDF5 (1.12.0) MPI-process 0: #000: PI-process 1: #000: H5F.c line 705 in H5Fcreate(): unable to create file major: File accessibility #000: H5F.c line 705 in H5Fcreate(): unable to create file major: File accessibility minor: H5F.c line 705 in H5Fcreate(): unable to create file major: File accessibility minor: Unable to open file #001: H5VLcallback.c line 3393 in H5VL_file_create(): file create failed Unable to open file #001: H5VLcallback.c line 3393 in H5VL_file_create(): file create failed majoH5F.c line 705 in H5Fcreate(): unable to create file major: File accessibility minor: Unable to open file #001: H5VLcallback.c line 3393 in H5VL_file_create(): file create failed major: Virtual Object Layer minor: Unable to create file minor: Unable to open file #001: H5VLcallback.c line 3393 in H5VL_file_create(): file create failed major: Virtual Object Layer major: Virtual Object Layer minor: Unable to create file #002: H5VLcallback.c lin minor: Unable to create file #002: H5VLcallback.c line r: Virtual Object Layer minor: Unable to create file #002: H5VLcallback.c line 3358 i #002: H5VLcallback.c line 3358 in H5VL__file_create(): file create failed major: Virtual Object Layer minor: Unable to create file #003: e 3358 in H5VL__file_create(): file create failed major: Virtual Object Layer minor: Unable to create file #003: H5VLnative_file.c line 65 in H5VL__native_file_create(): unable to create file H5VLnative_file.c line 65 in H5VL__native_file_create(): unable to create file major: File accessibility minor: Unable to open file #004: H5Fint.c line 1564 in H5F_open(): unable to open file: name = 'example.h5', tent_flags = 13 major: File accessibility minor: Unable to open file #005: 3358 in H5VL__file_create(): file create failed major: Virtual Object Layer minor: Unable to create file #003: H5VLnative_file.c line 65 in H5VL__native_file_create(): unable to create file mn H5VL__file_create(): file create failed major: Virtual Object Layer minor: Unable to create file #003: H5VLnative_file.c line 65 in H5VL__native_file_create(): unable to create file majo major: File accessibility minor: Unable to open file #004: H5Fint.c line 1564 in H5F_open(): unable to open file: name = 'example.h5', tent_flags = 13 major: File accessibility minr: File accessibility minor: Unable to open file #004: H5Fint.c line 1564 in H5F_open(): unable to open file: name = 'example.h5', tent_flags = 13 major: File accessibility H5FD.c line 741 in H5FD_open(): open failed major: Virtual File Layer minor: Unable to initialize object #006: H5FDmpio.c line 827 in H5FD__mpio_open(): MPI_File_open failed major: Internal error (too specific to document in detail) minor: Some MPI function failed #007: H5FDmpio.c linajor: File accessibility minor: Unable to open file #004: H5Fint.c line 1564 in H5F_open(): unable to open file: name = 'example.h5', tent_flags = 13 major: File accessibility minor: Unable to open file #005: H5FD.c line 741 in H5FD_open(): open failed major: Virtual File Layer minor: Unable to initialize object or: Unable to open file #005: H5FD.c line 741 in H5FD_open(): open failed major: Virtual File Layer mino minor: Unable to open file #005: H5FD.c line 741 in H5FD_open(): open failed major: Virtual File Layer minor: e 827 in H5FD__mpio_open(): MPI_ERR_INTERN: internal error major: Internal error (too specific to document in detail) minor: MPI Error String #006: H5FDmpio.c line 827 in H5FD__mpio_open(): MPI_File_open failed major: Internal error (too specific to document in detail) minor:r: Unable to initialize object #006: H5FDmpio.c line 827 in H5FD__mpio_open(): MPI_File_open failed major: Unable to initialize object #006: H5FDmpio.c line 827 in H5FD__mpio_open(): MPI_File_open failed major: Internal error (too specific to document in detail) Some MPI function failed #007: H5FDmpio.c line 827 in H5FD__mpio_open(): MPI_ERR_INTERN: internal error majHDF5-DIAG: Error detected in minor: Some MPI function failed #007: H5FDmpio.c line 827 in Internal error (too specific to document in detail) minor: Some MPI function failed #007: H5FDmpio.c line 827 in H5FD__mpio_open(or: Internal error (too specific to document in detail) minor: MPI Error String ): MPI_ERR_INTERN: internal error major: Internal error (too specific to document in detail) minor: MPI Error String HDF5 (1.12.0) MPI-process 0: #000: H5D.c line 143 in H5Dcreate2(): invalid location identifierH5FD__mpio_open(): MPI_ERR_INTERN: internal error major: Internal error (too specific to document in detail) minor: MPI Error String major: Invalid arguments to routine minor: Inappropriate type mpitest: ../hdf5.cpp:50: int main(int, char**): Assertion `dset >= 0' failed. HDF5-DIAG: Error det[archlinux:175084] *** Process received signal *** [archlinux:175084] Signal: Aborted (6) [archlinux:175084] Signal code: (-6) ected in HDF5 (1.12.0) MPI-procHDF5-DIAG: Error detHDF5-DIAG: Error detectess 3: #000: H5D.c line ed in HDF5 (1.12.0) MPI-procected in HDF5 (1.12.0) MPI-process143 in H5Dcreate2(): invalid location identifier major: Invalid arguments to routine mi 1: #000: H5D.c line 143 iess 2: #000: H5D.c line 143 in nor: Inappropriate type mpitest: ../hdf5.cpp:50: int main(int, char**): Assertion `dset >= 0' failed. [archlinux:175084] [ 0] /usr/lib/libpthread.so.0(+0x13960)[0x7fd2e81fc960] [archlinux:175084] [ 1] H5Dcreate2(): invalid location identifier major: Invalid arguments to routine minor:n H5Dcreate2(): invalid location identifier major: Invalid arguments to routine minor: [archlinux:175087] *** Process received signal *** [archlinux:175087] Signal: Aborted (6) [archlinux:175087] Signal code: (-6) Inappropriate type mpitest: ../hdf5.cpp:50: int main(int, char**): Assertion `dset >= 0' failed. Inappropriate type mpitest: ../hdf5.cpp:50: int main(int, char**): Assertion `dset >= 0' failed. /usr/lib/libc.so.6(gsignal+0x145)[0x7fd2e8058ef5] [archlinux:175084] [ 2] [archlinux:175086] *** Process received signal *** [archlinux:175086] Signal: Aborted (6) [archlinux:175086] Signal code: (-6) [archlinux:175085] *** Process received signal *** [archlinux:175085] Signal: Aborted (6) [archlinux:175085] Signal code: (-6) /usr/lib/libc.so.6(abort+0x116)[0x7fd2e8042862] [archlinux:175084] [ 3] [archlinux:175087] [ 0] /usr/lib/libc.so.6(+0x26747)[0x7fd2e8042747] [archlinux:175084] [ 4] /usr/lib/libpthread.so.0(+0x13960)[0x7fe239440960] [archlinux:175087] [ 1] [archlinux:175085] [ 0] [archlinux:175086] [ 0] /usr/lib/libpthread.so.0(+0x13960)[0x7fdf874da960] /usr/lib/libc.so.6(+0x35646)[0x7fd2e8051646] [archlinux:175084] [ 5] ./build/mpitest(main+0x36a)[0x55c70a5d3663] [archlinux:175084] [ 6] /usr/lib/libpthread.so.0(+0x13960)[0x7fec8926d960] [archlinux:175085] [ 1] [archlinux:175086] [ 1] /usr/lib/libc.so.6(gsignal+0x145)[0x7fe23929cef5] [archlinux:175087] [ 2] /usr/lib/libc.so.6(__libc_start_main+0xd5)[0x7fd2e8043b25] [archlinux:175084] [ 7] ./build/mpitest(_start+0x2e)[0x55c70a5d322e] [archlinux:175084] *** End of error message *** /usr/lib/libc.so.6(gsignal+0x145)[0x7fdf87336ef5] [archlinux:175086] [ 2] /usr/lib/libc.so.6(abort+0x116)[0x7fe239286862] [archlinux:175087] [ 3] /usr/lib/libc.so.6(gsignal+0x145)[0x7fec890c9ef5] [archlinux:175085] [ 2] /usr/lib/libc.so.6(abort+0x116)[0x7fdf87320862] [archlinux:175086] [ 3] /usr/lib/libc.so.6(+0x26747)[0x7fe239286747] [archlinux:175087] [ 4] /usr/lib/libc.so.6(abort+0x116)[0x7fec890b3862] [archlinux:175085] [ 3] /usr/lib/libc.so.6(+0x35646)[0x7fe239295646] [archlinux:175087] [ 5] ./build/mpitest(main+0x36a)[0x5599edcec663] [archlinux:175087] /usr/lib/libc.so.6(+0x26747)[0x7fec890b3747] [archlinux:175085] [ 4] /usr/lib/libc.so.6(+0x26747)[0x7fdf87320747] [archlinux:175086] [ 4] [ 6] /usr/lib/libc.so.6(__libc_start_main+0xd5)[0x7fe239287b25] [archlinux:175087] [ 7] ./build/mpitest(_start+0x2e)[0x5599edcec22e] [archlinux:175087] *** End of error message *** /usr/lib/libc.so.6(+0x35646)[0x7fdf8732f646] [archlinux:175086] [ 5] ./build/mpitest(main+0x36a)[0x5632bdef7663] [archlinux:175086] [ 6] /usr/lib/libc.so.6(+0x35646)[0x7fec890c2646] [archlinux:175085] [ 5] ./build/mpitest(main+0x36a)[0x55820ae1f663] [archlinux:175085] [ 6] /usr/lib/libc.so.6(__libc_start_main+0xd5)[0x7fec890b4b25] [archlinux:175085] [ 7] ./build/mpitest(_start+0x2e)[0x55820ae1f22e] [archlinux:175085] *** End of error message *** /usr/lib/libc.so.6(__libc_start_main+0xd5)[0x7fdf87321b25] [archlinux:175086] [ 7] ./build/mpitest(_start+0x2e)[0x5632bdef722e] [archlinux:175086] *** End of error message *** -------------------------------------------------------------------------- Primary job terminated normally, but 1 process returned a non-zero exit code. Per user-direction, the job has been aborted. -------------------------------------------------------------------------- -------------------------------------------------------------------------- mpirun noticed that process rank 0 with PID 0 on node archlinux exited on signal 6 (Aborted). -------------------------------------------------------------------------- [archlinux:175053] 3 more processes have sent help message help-mca-base.txt / find-available:not-valid [archlinux:175053] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages